BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008C07LP1|AL425832
(788 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1503 1538 0.0
>3x_Contig1503
Length = 10719
Score = 1538 bits (776), Expect = 0.0
Identities = 786/788 (99%), Gaps = 1/788 (0%)
Strand = Plus / Minus
Query: 1 ctccagtttaatatctaatactgacctctatactcagtatactgatataagacgaatggc 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 2817 ctccagtttaatatctaatactgacct-tatactcagtatactgatataagacgaatggc 2759
Query: 61 caagaggtttacgttcgggtttgcaacccttttgtttttcctgcagtgtgtggcattagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2758 caagaggtttacgttcgggtttgcaacccttttgtttttcctgcagtgtgtggcattagc 2699
Query: 121 ctttctaattttggcgtgtgtgtctgcaccggttttcgataatgtcagattggcaagttt 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 2698 ctttctaattttggcgtgtgtttctgcaccggttttcgataatgtcagattggcaagttt 2639
Query: 181 cgatgggatccattatggtgtgtttggatactgtgaagatgacggtggttcatgttcttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2638 cgatgggatccattatggtgtgtttggatactgtgaagatgacggtggttcatgttcttc 2579
Query: 241 tgctcaggcgaattatcacccggaaaatttggatgacgatgattcgaattggaagatgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2578 tgctcaggcgaattatcacccggaaaatttggatgacgatgattcgaattggaagatgaa 2519
Query: 301 taacgattcgagaaaagccttgggtagtatcttgatcgtgacaccaatcgctgctgggtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2518 taacgattcgagaaaagccttgggtagtatcttgatcgtgacaccaatcgctgctgggtt 2459
Query: 361 aacgtttttagcattggtcactagtttcctatgccaattcaggttctttgattcgagcac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2458 aacgtttttagcattggtcactagtttcctatgccaattcaggttctttgattcgagcac 2399
Query: 421 tttctggtttgttatgaatttcttgttctccatcttggcatttttatcgtctgctcttat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2398 tttctggtttgttatgaatttcttgttctccatcttggcatttttatcgtctgctcttat 2339
Query: 481 ctgcatcgtggtgatccttttgttttatcctcacgttacgtggtactcgtatattttaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2338 ctgcatcgtggtgatccttttgttttatcctcacgttacgtggtactcgtatattttaat 2279
Query: 541 tgcttctgctgtgttgaatttggtttgcttgccgttatgtttctttgctcgttctcaaac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2278 tgcttctgctgtgttgaatttggtttgcttgccgttatgtttctttgctcgttctcaaac 2219
Query: 601 ggcttctaatagtaagaacggacttgtcgatgaagaagatgaagatcgttcttcaacgtc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2218 ggcttctaatagtaagaacggacttgtcgatgaagaagatgaagatcgttcttcaacgtc 2159
Query: 661 tatcagagacaaattttataaagaagagtttaatcaaacagaggtgactaatttagatgc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2158 tatcagagacaaattttataaagaagagtttaatcaaacagaggtgactaatttagatgc 2099
Query: 721 tccatccattccggattattataaaggctcgaaaatcgtcaccagcaacactttaaactc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2098 tccatccattccggattattataaaggctcgaaaatcgtcaccagcaacactttaaactc 2039
Query: 781 taatacta 788
||||||||
Sbjct: 2038 taatacta 2031
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6499
Number of Sequences: 1807
Number of extensions: 6499
Number of successful extensions: 56
Number of sequences better than 1.0e-20: 1
length of query: 788
length of database: 10,358,551
effective HSP length: 16
effective length of query: 772
effective length of database: 10,329,639
effective search space: 7974481308
effective search space used: 7974481308
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)